STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN67233.1Phosphoglycerate mutase; Belongs to the phosphoglycerate mutase family. (189 aa)    
Predicted Functional Partners:
KRN65312.1
Fructose-2,6-bisphosphatase.
  
     0.765
KRN65462.1
Phosphoglycerate mutase; Belongs to the phosphoglycerate mutase family.
  
     0.692
KRN65507.1
D-allulose-6-phosphate 3-epimerase.
 
 
 0.556
gpmA
Phosphoglyceromutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.
  
 
0.547
gpmA-2
Phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.
  
 
0.547
KRN67232.1
Transcriptional regulator.
       0.544
KRN67320.1
xpkA protein.
  
 
 0.526
KRN66032.1
D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
  
 
 0.525
KRN67318.1
Nitroreductase; Belongs to the flavin oxidoreductase frp family.
  
 
 0.524
KRN65602.1
RNase HI; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
  
 
 0.521
Your Current Organism:
Pediococcus cellicola
NCBI taxonomy Id: 319652
Other names: AS 1.3787, DSM 17757, JCM 14152, LMG 22956, LMG:22956, P. cellicola, Pediococcus cellicola Zhang et al. 2005, Pediococcus sp. Z-1, Pediococcus sp. Z-8, strain Z-8
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