STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN66930.1Cyclopropane-fatty-acyl-phospholipid synthase. (392 aa)    
Predicted Functional Partners:
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
   
 
 0.721
KRN67741.1
Putative methyltransferase (putative).
  
 
 0.627
KRN67638.1
Glycine D-amino acid oxidase.
    
  0.560
glyA
Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.
    
 0.559
KRN66929.1
Lipoprotein.
       0.546
KRN67804.1
SAM-dependent methyltransferase.
    
 0.545
KRN65337.1
Rrna large subunit methyltransferase a.
    
 0.545
metK
metK protein; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.
    
 0.519
KRN67327.1
Acetaldehyde dehydrogenase.
     
 0.497
KRN65881.1
Succinate-semialdehyde dehydrogenase (NADP+); Belongs to the aldehyde dehydrogenase family.
    
 0.497
Your Current Organism:
Pediococcus cellicola
NCBI taxonomy Id: 319652
Other names: AS 1.3787, DSM 17757, JCM 14152, LMG 22956, LMG:22956, P. cellicola, Pediococcus cellicola Zhang et al. 2005, Pediococcus sp. Z-1, Pediococcus sp. Z-8, strain Z-8
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