STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN66936.1D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family. (431 aa)    
Predicted Functional Partners:
KRN67774.1
Hypothetical protein.
 
 
 0.972
KRN67643.1
Hypothetical protein.
  
 
 0.968
KRN66781.1
Hypothetical protein; Belongs to the peptidase S11 family.
 
  
 
0.944
KRN66935.1
Sortase related acyltransferase.
    
  0.863
KRN67554.1
N-acetylmuramoyl-L-alanine amidase.
   
 
 0.788
KRN65331.1
Penicillin binding protein 2B.
 
 
 0.784
KRN67723.1
Cell division protein FtsI penicillin-binding protein 2.
  
 
 0.747
KRN67611.1
Carboxy-terminal processing proteinase; Belongs to the peptidase S41A family.
  
 0.679
KRN66937.1
Signal transduction histidine kinase.
 
  
 0.659
KRN66938.1
Two-component system, OmpR family, phosphate regulon response regulator OmpR.
  
  
 0.604
Your Current Organism:
Pediococcus cellicola
NCBI taxonomy Id: 319652
Other names: AS 1.3787, DSM 17757, JCM 14152, LMG 22956, LMG:22956, P. cellicola, Pediococcus cellicola Zhang et al. 2005, Pediococcus sp. Z-1, Pediococcus sp. Z-8, strain Z-8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.