STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN66938.1Two-component system, OmpR family, phosphate regulon response regulator OmpR. (229 aa)    
Predicted Functional Partners:
KRN66937.1
Signal transduction histidine kinase.
 0.992
KRN64325.1
Histidine protein kinase sensor protein.
 
 0.975
KRN66712.1
Signal transduction histidine kinase.
 0.952
KRN67059.1
Hypothetical protein.
 0.945
KRN67735.1
Signal transduction histidine kinase.
 0.944
KRN66635.1
Two-component system, sensor histidine kinase.
 0.925
KRN66202.1
Histidine protein kinase plnb.
  
 0.893
KRN67584.1
Pyk protein; Belongs to the pyruvate kinase family.
     
 0.826
KRN67539.1
Riboflavin biosynthesis protein RibF; Belongs to the ribF family.
 
  
 0.726
KRN67278.1
Hypothetical protein.
   
 
 0.717
Your Current Organism:
Pediococcus cellicola
NCBI taxonomy Id: 319652
Other names: AS 1.3787, DSM 17757, JCM 14152, LMG 22956, LMG:22956, P. cellicola, Pediococcus cellicola Zhang et al. 2005, Pediococcus sp. Z-1, Pediococcus sp. Z-8, strain Z-8
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.