STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN66965.1Hypothetical protein. (190 aa)    
Predicted Functional Partners:
KRN66966.1
Permease domain-containing protein.
  
  
 0.763
KRN66967.1
ABC transporter ATP-binding protein.
   
 
 0.747
ftsZ
Ftsz; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
   
 
 0.653
KRN67584.1
Pyk protein; Belongs to the pyruvate kinase family.
   
 0.535
KRN67205.1
Short-chain dehydrogenase reductase SDR.
 
  
 0.484
KRN67327.1
Acetaldehyde dehydrogenase.
   
 
 0.448
KRN66745.1
Ribonucleotide-diphosphate reductase subunit beta.
   
 
  0.448
KRN65881.1
Succinate-semialdehyde dehydrogenase (NADP+); Belongs to the aldehyde dehydrogenase family.
   
 
 0.448
KRN66968.1
Choloylglycine hydrolase.
       0.444
KRN67551.1
Hypothetical protein; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.
   
 
 0.438
Your Current Organism:
Pediococcus cellicola
NCBI taxonomy Id: 319652
Other names: AS 1.3787, DSM 17757, JCM 14152, LMG 22956, LMG:22956, P. cellicola, Pediococcus cellicola Zhang et al. 2005, Pediococcus sp. Z-1, Pediococcus sp. Z-8, strain Z-8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.