Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KRN66970.1C-di-GMP-specific phosphodiesterase. (233 aa)    
Predicted Functional Partners:
KRN66969.1
Hypothetical protein.
 
 
 0.931
KRN66971.1
ABC superfamily ATP binding cassette transporter, binding protein.
 
 
 0.923
KRN67024.1
Signal transduction diguanylate cyclase.
 
 
 0.894
KRN66880.1
Glycosyltransferase.
 
 
 0.603
KRN66876.1
Hypothetical protein.
 
    0.549
KRN66875.1
Glycosyltransferase.
 
    0.467
KRN66108.1
ptsH protein.
     
 0.467
KRN66916.1
Hypothetical protein.
  
     0.460
KRN66058.1
Glycosyltransferase.
  
 
 0.460
KRN66886.1
Integral membrane protein.
 
     0.424
Your Current Organism:
Pediococcus cellicola
NCBI taxonomy Id: 319652
Other names: AS 1.3787, DSM 17757, JCM 14152, LMG 22956, LMG:22956, P. cellicola, Pediococcus cellicola Zhang et al. 2005, Pediococcus sp. Z-1, Pediococcus sp. Z-8, strain Z-8
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