STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KRN66987.1Alpha beta superfamily hydrolase. (270 aa)    
Predicted Functional Partners:
KRN66992.1
Malonate decarboxylase, alpha subunit.
 
 
  0.846
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
   
 0.845
KRN66989.1
Malonate decarboxylase, beta subunit.
 
  
 0.838
KRN66991.1
triphosphoribosyl-dephospho-CoA synthase MdcB.
 
     0.791
KRN66988.1
phosphoribosyl-dephospho-CoA transferase.
 
     0.767
KRN66990.1
Malonate decarboxylase delta subunit.
 
   
 0.753
acpP
Hypothetical protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 0.731
dltC
Hypothetical protein; Carrier protein involved in the D-alanylation of lipoteichoic acid (LTA). The loading of thioester-linked D-alanine onto DltC is catalyzed by D-alanine--D-alanyl carrier protein ligase DltA. The DltC- carried D-alanyl group is further transferred to cell membrane phosphatidylglycerol (PG) by forming an ester bond, probably catalyzed by DltD. D-alanylation of LTA plays an important role in modulating the properties of the cell wall in Gram-positive bacteria, influencing the net charge of the cell wall.
  
 0.731
KRN66993.1
Hypothetical protein.
 
  
 0.692
cinA
Competence damage-inducible protein A; Belongs to the CinA family.
    
  0.633
Your Current Organism:
Pediococcus cellicola
NCBI taxonomy Id: 319652
Other names: AS 1.3787, DSM 17757, JCM 14152, LMG 22956, LMG:22956, P. cellicola, Pediococcus cellicola Zhang et al. 2005, Pediococcus sp. Z-1, Pediococcus sp. Z-8, strain Z-8
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