STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN66773.1Hypothetical protein. (166 aa)    
Predicted Functional Partners:
KRN66774.1
Hypothetical protein.
 
 0.998
KRN66777.1
PTS system mannose-specific transporter subunit IIC.
 
 0.994
KRN66776.1
PTS system mannose-specific transporter subunit IID.
 
 0.991
KRN65530.1
Mannose-specific PTS system component IIC.
 
 0.985
KRN65035.1
Phosphoenolpyruvate-dependent sugar phosphotransferase system EIID.
 
 0.984
KRN65036.1
Hosphoenolpyruvate-dependent sugar phosphotransferase system iic component.
 
 0.980
KRN66108.1
ptsH protein.
  
 0.980
KRN65046.1
PTS system, mannose-specific IID component.
 
 0.975
KRN65531.1
Mannose-specific PTS system component IID.
 
 0.975
KRN65051.1
PTS system mannose fructose sorbose family IIDsubunit.
 
 0.973
Your Current Organism:
Pediococcus cellicola
NCBI taxonomy Id: 319652
Other names: AS 1.3787, DSM 17757, JCM 14152, LMG 22956, LMG:22956, P. cellicola, Pediococcus cellicola Zhang et al. 2005, Pediococcus sp. Z-1, Pediococcus sp. Z-8, strain Z-8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.