STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRN65893.1Oxidoreductase. (282 aa)    
Predicted Functional Partners:
KRN65894.1
Proline iminopeptidase (pip); Releases the N-terminal proline from various substrates. Belongs to the peptidase S33 family.
  
 
 0.669
KRN67209.1
Aryl-alcohol dehydrogenase related enzyme.
  
0.626
KRN66189.1
Aldo keto reductase.
 
0.626
KRN67505.1
Glyoxalase family protein.
  
 0.579
KRN67292.1
Ring-cleaving dioxygenase.
  
 0.579
tarJ
Ribitol-5-phosphate 2-dehydrogenase; Catalyzes the NADPH dependent reduction of D-ribulose 5- phosphate to D-ribitol 5-phosphate; Belongs to the zinc-containing alcohol dehydrogenase family.
  
 0.572
KRN66954.1
Aryl-alcohol dehydrogenase.
   
 0.567
KRN67638.1
Glycine D-amino acid oxidase.
  
 
 0.558
KRN67235.1
Alcohol dehydrogenase.
  
 0.553
KRN67522.1
D-lactate dehydrogenase, LdhA; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
  
 
 0.539
Your Current Organism:
Pediococcus cellicola
NCBI taxonomy Id: 319652
Other names: AS 1.3787, DSM 17757, JCM 14152, LMG 22956, LMG:22956, P. cellicola, Pediococcus cellicola Zhang et al. 2005, Pediococcus sp. Z-1, Pediococcus sp. Z-8, strain Z-8
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