STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SER00545.1Putative ABC transport system ATP-binding protein. (216 aa)    
Predicted Functional Partners:
SER00575.1
Putative ABC transport system permease protein.
  
 0.984
SER73381.1
ATP-binding cassette, subfamily B.
 
     
0.880
pstB
Phosphate transport system ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
 
     
0.859
SER28412.1
Putative ABC transport system ATP-binding protein.
 
  
 
0.729
SER22375.1
ABC-type lipoprotein export system, ATPase component.
  
  
 
0.652
SER00681.1
ABC transporter transmembrane region.
 
    
0.645
SER07463.1
ATP-binding cassette, subfamily B.
 
     
0.579
SER00498.1
Glycosyltransferase involved in cell wall bisynthesis.
       0.512
SER36695.1
Putative ABC transport system ATP-binding protein.
  
  
 
0.512
SER80327.1
Putative ABC transport system ATP-binding protein.
  
  
 
0.511
Your Current Organism:
Pediococcus ethanolidurans
NCBI taxonomy Id: 319653
Other names: AS 1.3889, DSM 22301, LMG 23354, LMG:23354, P. ethanolidurans, Pediococcus ethanolidurans Liu et al. 2006, Pediococcus sp. Z-9, strain Z-9
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