STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SER24888.1DNA-binding transcriptional regulator, MarR family. (152 aa)    
Predicted Functional Partners:
SER24857.1
Drug resistance transporter, EmrB/QacA subfamily; Belongs to the major facilitator superfamily.
 
  
 0.866
SER01475.1
PTS system IIA component, Glc family (TC 4.A.1).
   
 
 0.812
SER02986.1
PTS system, glucose subfamily, IIA component.
   
 
 0.812
SER30922.1
N-acetylglucosamine PTS, EIICBA; PTS system N-acetylglucosamine-specific IIA component, Glc family (TC 4.A.1.1.2)/PTS system N-acetylglucosamine-specific IIB component, Glc family (TC 4.A.1.1.2)/PTS system N-acetylglucosamine-specific IIC component, Glc family (TC 4.A.1.1.2).
   
 
 0.812
SER84160.1
Pts22CBA protein; PTS system N-acetylglucosamine-specific IIA component, Glc family /PTS system N-acetylglucosamine-specific IIB component, Glc family.
   
 
 0.812
SER84091.1
PTS system, beta-glucosides-specific IIC component.
   
 
 0.812
SER85594.1
Uncharacterized protein; PTS system IIA component, Glc family (TC 4.A.1)/PTS system IIB component, Glc family (TC 4.A.1)/PTS system IIC component, Glc family (TC 4.A.1).
   
 
 0.812
SER86608.1
PTS system, beta-glucosides-specific IIC component.
   
 
 0.812
SER86928.1
Beta-glucosides PTS, EIIBCA; PTS system beta-glucoside-specific IIA component, Glc family (TC 4.A.1.2.6)/PTS system beta-glucoside-specific IIB component, Glc family (TC 4.A.1.2.6)/PTS system beta-glucoside-specific IIC component, Glc family (TC 4.A.1.2.6).
   
 
 0.812
SER24947.1
Protein of unknown function.
 
     0.595
Your Current Organism:
Pediococcus ethanolidurans
NCBI taxonomy Id: 319653
Other names: AS 1.3889, DSM 22301, LMG 23354, LMG:23354, P. ethanolidurans, Pediococcus ethanolidurans Liu et al. 2006, Pediococcus sp. Z-9, strain Z-9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.