STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SER25125.1PTS system, galactitol-specific IIB component. (101 aa)    
Predicted Functional Partners:
SER25098.1
PTS system IIA component, Gat family (TC 4.A.5).
 
 
 0.997
SER25155.1
PTS system IIC component, Gat family.
 
 
 0.991
SER25183.1
PTS system, galactitol-specific IIC component.
 
 
 0.991
SER88236.1
Phosphocarrier protein.
    
 0.950
SER03070.1
Transcriptional antiterminator.
  
 
 0.838
SER25318.1
PTS system, fructose-specific, IIB component/PTS system, fructose subfamily, IIA component/PTS system, fructose subfamily, IIC component.
 
 
 0.772
SER25033.1
Galactose-6-phosphate isomerase.
 
     0.765
SER25006.1
Galactose-6-phosphate isomerase.
 
     0.757
SER04986.1
Transcriptional antiterminator.
  
 
 0.750
SER05178.1
Transcriptional antiterminator.
  
 
 0.750
Your Current Organism:
Pediococcus ethanolidurans
NCBI taxonomy Id: 319653
Other names: AS 1.3889, DSM 22301, LMG 23354, LMG:23354, P. ethanolidurans, Pediococcus ethanolidurans Liu et al. 2006, Pediococcus sp. Z-9, strain Z-9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.