STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SER26279.1Putative glutamine transport system ATP-binding protein. (246 aa)    
Predicted Functional Partners:
SER26178.1
Amino acid ABC transporter membrane protein 2, PAAT family (TC 3.A.1.3.-).
 0.999
SER26251.1
Amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-).
 
 0.999
SER26216.1
Putative glutamine transport system permease protein.
 0.997
SER71844.1
ABC transmembrane type-1 domain-containing protein; Amino acid ABC transporter substrate-binding protein, PAAT family /amino acid ABC transporter membrane protein, PAAT family.
 0.997
SER78147.1
Polar amino acid transport system permease protein.
 0.989
SER78196.1
Amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-).
 
 0.934
SER73381.1
ATP-binding cassette, subfamily B.
   
 
0.897
SER81147.1
ATP-binding cassette, subfamily B.
     
0.591
SER69013.1
Phosphonate transport system substrate-binding protein.
  
 
  0.581
SER91508.1
ABC-2 type transport system ATP-binding protein.
   
 
0.555
Your Current Organism:
Pediococcus ethanolidurans
NCBI taxonomy Id: 319653
Other names: AS 1.3889, DSM 22301, LMG 23354, LMG:23354, P. ethanolidurans, Pediococcus ethanolidurans Liu et al. 2006, Pediococcus sp. Z-9, strain Z-9
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