Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SER05589.1 | SER39950.1 | SAMN04487973_101165 | SAMN04487973_1065 | Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA). | Proton-dependent oligopeptide transporter, POT family. | 0.542 |
SER05589.1 | SER89948.1 | SAMN04487973_101165 | SAMN04487973_1263 | Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA). | Zinc-binding alcohol dehydrogenase family protein; Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily. | 0.515 |
SER05589.1 | SER96117.1 | SAMN04487973_101165 | SAMN04487973_1353 | Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA). | Hypothetical protein. | 0.471 |
SER06954.1 | SER23274.1 | SAMN04487973_101209 | SAMN04487973_10358 | Putative endopeptidase. | Aminopeptidase N. | 0.778 |
SER06954.1 | SER39950.1 | SAMN04487973_101209 | SAMN04487973_1065 | Putative endopeptidase. | Proton-dependent oligopeptide transporter, POT family. | 0.569 |
SER22773.1 | SER29875.1 | SAMN04487973_10342 | SAMN04487973_10453 | Dihydrofolate reductase. | Uncharacterized protein YdaT. | 0.627 |
SER22773.1 | SER39950.1 | SAMN04487973_10342 | SAMN04487973_1065 | Dihydrofolate reductase. | Proton-dependent oligopeptide transporter, POT family. | 0.543 |
SER22773.1 | SER41044.1 | SAMN04487973_10342 | SAMN04487973_10644 | Dihydrofolate reductase. | Hypothetical protein. | 0.563 |
SER22773.1 | SER54692.1 | SAMN04487973_10342 | SAMN04487973_10925 | Dihydrofolate reductase. | Hypothetical protein. | 0.564 |
SER22773.1 | SER89948.1 | SAMN04487973_10342 | SAMN04487973_1263 | Dihydrofolate reductase. | Zinc-binding alcohol dehydrogenase family protein; Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily. | 0.637 |
SER23274.1 | SER06954.1 | SAMN04487973_10358 | SAMN04487973_101209 | Aminopeptidase N. | Putative endopeptidase. | 0.778 |
SER23274.1 | SER39950.1 | SAMN04487973_10358 | SAMN04487973_1065 | Aminopeptidase N. | Proton-dependent oligopeptide transporter, POT family. | 0.584 |
SER23274.1 | SER96117.1 | SAMN04487973_10358 | SAMN04487973_1353 | Aminopeptidase N. | Hypothetical protein. | 0.495 |
SER29875.1 | SER22773.1 | SAMN04487973_10453 | SAMN04487973_10342 | Uncharacterized protein YdaT. | Dihydrofolate reductase. | 0.627 |
SER29875.1 | SER39950.1 | SAMN04487973_10453 | SAMN04487973_1065 | Uncharacterized protein YdaT. | Proton-dependent oligopeptide transporter, POT family. | 0.545 |
SER29875.1 | SER41044.1 | SAMN04487973_10453 | SAMN04487973_10644 | Uncharacterized protein YdaT. | Hypothetical protein. | 0.545 |
SER29875.1 | SER54692.1 | SAMN04487973_10453 | SAMN04487973_10925 | Uncharacterized protein YdaT. | Hypothetical protein. | 0.544 |
SER29875.1 | SER89948.1 | SAMN04487973_10453 | SAMN04487973_1263 | Uncharacterized protein YdaT. | Zinc-binding alcohol dehydrogenase family protein; Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily. | 0.544 |
SER39950.1 | SER05589.1 | SAMN04487973_1065 | SAMN04487973_101165 | Proton-dependent oligopeptide transporter, POT family. | Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA). | 0.542 |
SER39950.1 | SER06954.1 | SAMN04487973_1065 | SAMN04487973_101209 | Proton-dependent oligopeptide transporter, POT family. | Putative endopeptidase. | 0.569 |
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