node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
frr | rplD | SAMN04487973_10885 | SAMN04487973_11177 | Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family. | Large subunit ribosomal protein L4; Forms part of the polypeptide exit tunnel. | 0.999 |
frr | rplM | SAMN04487973_10885 | SAMN04487973_11146 | Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family. | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.999 |
frr | rplP | SAMN04487973_10885 | SAMN04487973_11171 | Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family. | Large subunit ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family. | 0.999 |
frr | rplQ | SAMN04487973_10885 | SAMN04487973_11152 | Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family. | Large subunit ribosomal protein L17. | 0.999 |
frr | rplT | SAMN04487973_10885 | SAMN04487973_11017 | Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family. | Large subunit ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.999 |
frr | rplU | SAMN04487973_10885 | SAMN04487973_10241 | Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family. | Large subunit ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.998 |
frr | rpmA | SAMN04487973_10885 | SAMN04487973_10243 | Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family. | LSU ribosomal protein L27P; Belongs to the bacterial ribosomal protein bL27 family. | 0.999 |
frr | rpsB | SAMN04487973_10885 | SAMN04487973_10888 | Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family. | SSU ribosomal protein S2P; Belongs to the universal ribosomal protein uS2 family. | 0.999 |
frr | rpsL | SAMN04487973_10885 | SAMN04487973_11183 | Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family. | SSU ribosomal protein S12P; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit. | 0.999 |
frr | rpsP | SAMN04487973_10885 | SAMN04487973_10283 | Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family. | SSU ribosomal protein S16P; Belongs to the bacterial ribosomal protein bS16 family. | 0.998 |
rplD | frr | SAMN04487973_11177 | SAMN04487973_10885 | Large subunit ribosomal protein L4; Forms part of the polypeptide exit tunnel. | Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family. | 0.999 |
rplD | rplM | SAMN04487973_11177 | SAMN04487973_11146 | Large subunit ribosomal protein L4; Forms part of the polypeptide exit tunnel. | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.999 |
rplD | rplP | SAMN04487973_11177 | SAMN04487973_11171 | Large subunit ribosomal protein L4; Forms part of the polypeptide exit tunnel. | Large subunit ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family. | 0.999 |
rplD | rplQ | SAMN04487973_11177 | SAMN04487973_11152 | Large subunit ribosomal protein L4; Forms part of the polypeptide exit tunnel. | Large subunit ribosomal protein L17. | 0.999 |
rplD | rplT | SAMN04487973_11177 | SAMN04487973_11017 | Large subunit ribosomal protein L4; Forms part of the polypeptide exit tunnel. | Large subunit ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.999 |
rplD | rplU | SAMN04487973_11177 | SAMN04487973_10241 | Large subunit ribosomal protein L4; Forms part of the polypeptide exit tunnel. | Large subunit ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. | 0.999 |
rplD | rpmA | SAMN04487973_11177 | SAMN04487973_10243 | Large subunit ribosomal protein L4; Forms part of the polypeptide exit tunnel. | LSU ribosomal protein L27P; Belongs to the bacterial ribosomal protein bL27 family. | 0.999 |
rplD | rpsB | SAMN04487973_11177 | SAMN04487973_10888 | Large subunit ribosomal protein L4; Forms part of the polypeptide exit tunnel. | SSU ribosomal protein S2P; Belongs to the universal ribosomal protein uS2 family. | 0.999 |
rplD | rpsL | SAMN04487973_11177 | SAMN04487973_11183 | Large subunit ribosomal protein L4; Forms part of the polypeptide exit tunnel. | SSU ribosomal protein S12P; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit. | 0.999 |
rplD | rpsP | SAMN04487973_11177 | SAMN04487973_10283 | Large subunit ribosomal protein L4; Forms part of the polypeptide exit tunnel. | SSU ribosomal protein S16P; Belongs to the bacterial ribosomal protein bS16 family. | 0.999 |