Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SER84607.1 | SER84635.1 | SAMN04487973_12026 | SAMN04487973_12027 | His Kinase A (phospho-acceptor) domain-containing protein. | DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. | 0.994 |
SER84607.1 | SER84659.1 | SAMN04487973_12026 | SAMN04487973_12028 | His Kinase A (phospho-acceptor) domain-containing protein. | Hypothetical protein. | 0.441 |
SER84635.1 | SER84607.1 | SAMN04487973_12027 | SAMN04487973_12026 | DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. | His Kinase A (phospho-acceptor) domain-containing protein. | 0.994 |
SER84635.1 | SER84659.1 | SAMN04487973_12027 | SAMN04487973_12028 | DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. | Hypothetical protein. | 0.478 |
SER84635.1 | SER84687.1 | SAMN04487973_12027 | SAMN04487973_12029 | DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. | Inosine-5'-monophosphate dehydrogenase; Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides. | 0.423 |
SER84659.1 | SER84607.1 | SAMN04487973_12028 | SAMN04487973_12026 | Hypothetical protein. | His Kinase A (phospho-acceptor) domain-containing protein. | 0.441 |
SER84659.1 | SER84635.1 | SAMN04487973_12028 | SAMN04487973_12027 | Hypothetical protein. | DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. | 0.478 |
SER84659.1 | SER84687.1 | SAMN04487973_12028 | SAMN04487973_12029 | Hypothetical protein. | Inosine-5'-monophosphate dehydrogenase; Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides. | 0.416 |
SER84687.1 | SER84635.1 | SAMN04487973_12029 | SAMN04487973_12027 | Inosine-5'-monophosphate dehydrogenase; Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides. | DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. | 0.423 |
SER84687.1 | SER84659.1 | SAMN04487973_12029 | SAMN04487973_12028 | Inosine-5'-monophosphate dehydrogenase; Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides. | Hypothetical protein. | 0.416 |