Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SER87444.1Putative ABC transport system permease protein. (482 aa)    
Predicted Functional Partners:
SER87467.1
Putative ABC transport system ATP-binding protein.
 
 0.993
SER22375.1
ABC-type lipoprotein export system, ATPase component.
 
 0.890
SER80327.1
Putative ABC transport system ATP-binding protein.
 
 0.882
SER28412.1
Putative ABC transport system ATP-binding protein.
  
 0.866
SER36695.1
Putative ABC transport system ATP-binding protein.
  
 0.866
SER55809.1
Putative ABC transport system ATP-binding protein.
  
 0.866
SER87513.1
Two-component system, OmpR family, sensor histidine kinase CiaH.
   
 0.859
SER94464.1
Signal transduction histidine kinase.
   
 0.755
SER80295.1
Putative ABC transport system permease protein.
 
 
 0.685
SER55854.1
Putative ABC transport system permease protein.
  
 
 0.582
Your Current Organism:
Pediococcus ethanolidurans
NCBI taxonomy Id: 319653
Other names: AS 1.3889, DSM 22301, LMG 23354, LMG:23354, P. ethanolidurans, Pediococcus ethanolidurans Liu et al. 2006, Pediococcus sp. Z-9, strain Z-9
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