STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001375595_00338Unannotated protein. (242 aa)    
Predicted Functional Partners:
GCA_001375595_00337
Unannotated protein.
 
     0.809
GCA_001375595_00336
Unannotated protein.
 
     0.672
GCA_001375595_00335
Unannotated protein.
 
     0.628
GCA_001375595_00334
Unannotated protein.
       0.580
GCA_001375595_00332
Unannotated protein.
       0.576
GCA_001375595_00333
Unannotated protein.
       0.576
GCA_001375595_00347
Unannotated protein.
 
     0.549
GCA_001375595_00352
Unannotated protein.
 
     0.522
GCA_001375595_00339
Unannotated protein.
 
     0.510
GCA_001375595_00346
Unannotated protein.
 
     0.481
Your Current Organism:
Phenylobacterium immobile
NCBI taxonomy Id: 31967
Other names: P. immobile (ATCC 35973), Phenylobacterium immobile (ATCC 35973), Phenylobacterium immobile (strain E)
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.