STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001375595_00455Unannotated protein. (288 aa)    
Predicted Functional Partners:
GCA_001375595_00457
Unannotated protein.
  
   0.712
GCA_001375595_00456
Unannotated protein.
       0.661
GCA_001375595_00454
Unannotated protein.
       0.635
GCA_001375595_00453
Unannotated protein.
       0.571
GCA_001375595_01538
Unannotated protein.
 
   0.486
GCA_001375595_00946
Unannotated protein.
      0.485
GCA_001375595_00452
Unannotated protein.
       0.481
GCA_001375595_00459
Unannotated protein.
       0.470
GCA_001375595_00466
Unannotated protein.
  
  
 0.464
GCA_001375595_02266
Unannotated protein.
  
   
 0.464
Your Current Organism:
Phenylobacterium immobile
NCBI taxonomy Id: 31967
Other names: P. immobile (ATCC 35973), Phenylobacterium immobile (ATCC 35973), Phenylobacterium immobile (strain E)
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.