STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dgeo_0653PFAM: PhoU: (2.6e-19); KEGG: dra:DR2053 phosphate transport system regulatory protein PhoU, putative, ev=5e-74, 75% identity. (227 aa)    
Predicted Functional Partners:
pstB
Phosphate ABC transporter ATP-binding protein, PhoT family; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
 
  
 0.981
Dgeo_0651
Phosphate ABC transporter membrane protein 2, PhoT family; TIGRFAM: Phosphate transport system permease protein 2: (9.4e-105); PFAM: binding-protein-dependent transport systems inner membrane component: (1.2e-23); KEGG: dra:DRA0159 phosphate transport system permease protein, ev=1e-120, 79% identity; TC 3.A.1.7.1.
 
  
 0.972
Dgeo_0650
Phosphate ABC transporter membrane protein 1, PhoT family; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
 
  
 0.906
Dgeo_0649
Phosphate ABC transporter substrate-binding protein, PhoT family; TIGRFAM: Periplasmic phosphate binding protein: (1.1e-107); PFAM: extracellular solute-binding protein, family 1: (1.1e-17); KEGG: dra:DRA0157 phosphate transport system substrate-binding protein, ev=1e-158, 83% identity; TC 3.A.1.7.1; Belongs to the PstS family.
  
  
 0.635
metG
methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation; Belongs to the class-I aminoacyl-tRNA synthetase family. MetG type 2B subfamily.
     
 0.438
Dgeo_1674
Diguanylate cyclase containing PAS domain; PFAM: GGDEF: (4.3e-08); KEGG: syn:slr0359 hypothetical protein, ev=8e-16, 31% identity.
  
  
 0.401
Your Current Organism:
Deinococcus geothermalis
NCBI taxonomy Id: 319795
Other names: D. geothermalis DSM 11300, Deinococcus geothermalis AG-3a, Deinococcus geothermalis CIP 105573, Deinococcus geothermalis DSM 11300, Deinococcus geothermalis str. DSM 11300, Deinococcus geothermalis strain DSM 11300
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.