STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dgeo_1128KEGG: dra:DRA0298 putative copper resistance protein D, ev=1e-15, 49% identity. (115 aa)    
Predicted Functional Partners:
Dgeo_1131
Hypothetical protein; PFAM: nuclear export factor GLE1: (5.3e-06); KEGG: bat:BAS1775 hypothetical protein, ev=9e-20, 37% identity.
  
  
 0.873
Dgeo_1130
PFAM: copper resistance protein CopC: (7.8e-32); KEGG: dra:DRA0299 copper resistance protein, putative, ev=3e-27, 52% identity.
  
  
 0.843
Dgeo_1129
KEGG: dra:DRA0298 putative copper resistance protein D, ev=6e-21, 44% identity.
       0.773
Dgeo_1127
KEGG: dra:DR1365 aspartate kinase, ev=0.0, 82% identity; TIGRFAM: aspartate kinase: (1.1e-148) aspartate kinase, monofunctional class: (1.6e-127); PFAM: aspartate/glutamate/uridylate kinase: (5.7e-67) amino acid-binding ACT: (1.9e-12); Belongs to the aspartokinase family.
       0.646
Dgeo_1132
Hypothetical protein.
       0.463
Your Current Organism:
Deinococcus geothermalis
NCBI taxonomy Id: 319795
Other names: D. geothermalis DSM 11300, Deinococcus geothermalis AG-3a, Deinococcus geothermalis CIP 105573, Deinococcus geothermalis DSM 11300, Deinococcus geothermalis str. DSM 11300, Deinococcus geothermalis strain DSM 11300
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.