STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dgeo_1719PFAM: oxidoreductase, molybdopterin binding: (2e-56); KEGG: dra:DR0716 hypothetical protein, ev=7e-96, 80% identity. (198 aa)    
Predicted Functional Partners:
Dgeo_1718
PFAM: Uracil-DNA glycosylase superfamily: (8.2e-20); KEGG: dra:DR0715 G/U mismatch-specific DNA glycosylase, ev=2e-71, 78% identity.
       0.840
Dgeo_1717
KEGG: dra:DR0714 hypothetical protein, ev=2e-43, 53% identity.
       0.801
Dgeo_1720
KEGG: ttj:TTHA1581 hypothetical protein, ev=3e-79, 51% identity.
       0.781
msrQ
Ferric reductase-like protein transmembrane component-like protein; Part of the MsrPQ system that repairs oxidized cell envelope proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated cell envelope proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, [...]
  
  
 0.702
Dgeo_0329
TIGRFAM: molybdopterin converting factor, subunit 1: (2.1e-31); PFAM: molybdopterin biosynthesis MoaE: (2.5e-39) thiamineS: (2.3e-22); KEGG: dra:DR2607 molybdenum cofactor biosynthesis protein D/E, ev=5e-84, 66% identity.
 
   
 0.563
Dgeo_0407
Cytochrome c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
   
 
 0.532
Your Current Organism:
Deinococcus geothermalis
NCBI taxonomy Id: 319795
Other names: D. geothermalis DSM 11300, Deinococcus geothermalis AG-3a, Deinococcus geothermalis CIP 105573, Deinococcus geothermalis DSM 11300, Deinococcus geothermalis str. DSM 11300, Deinococcus geothermalis strain DSM 11300
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.