STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dgeo_1950Protein containing PATAN domain; KEGG: dra:DR0150 hypothetical protein, ev=3e-55, 59% identity. (190 aa)    
Predicted Functional Partners:
Dgeo_0508
PFAM: protein of unknown function DUF490: (0.00011); KEGG: dra:DR1461 hypothetical protein, ev=0.0, 48% identity.
  
     0.737
Dgeo_1768
KEGG: dra:DR0573 hypothetical protein, ev=0.0, 57% identity.
  
     0.716
Dgeo_1316
KEGG: dra:DR1115 S-layer-like array-related protein, ev=1e-156, 66% identity.
  
     0.708
Dgeo_1457
PFAM: FAD dependent oxidoreductase: (1.9e-24); KEGG: dra:DR1673 oxidoreductase, putative, ev=1e-107, 61% identity.
  
     0.707
Dgeo_1011
Phospholipase D-like domains; KEGG: dra:DR1179 hypothetical protein, ev=1e-143, 56% identity.
  
     0.704
Dgeo_1817
KEGG: dra:DR0855 hypothetical protein, ev=0.0, 59% identity.
  
     0.697
Dgeo_0204
PFAM: E3 binding: (2.4e-13); KEGG: dra:DR0131 hypothetical protein, ev=4e-66, 37% identity.
  
     0.691
Dgeo_0820
PFAM: cell wall hydrolase/autolysin: (2.3e-05); KEGG: dra:DR1469 hypothetical protein, ev=1e-164, 66% identity.
  
     0.687
Dgeo_2257
KEGG: dra:DR0067 hypothetical protein, ev=5e-81, 55% identity.
  
     0.687
Dgeo_1619
PFAM: N-formylglutamate amidohydrolase: (2.6e-57); KEGG: dra:DR1397 hypothetical protein, ev=2e-99, 71% identity.
  
     0.659
Your Current Organism:
Deinococcus geothermalis
NCBI taxonomy Id: 319795
Other names: D. geothermalis DSM 11300, Deinococcus geothermalis AG-3a, Deinococcus geothermalis CIP 105573, Deinococcus geothermalis DSM 11300, Deinococcus geothermalis str. DSM 11300, Deinococcus geothermalis strain DSM 11300
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.