STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFA39280.1Uncharacterized domain 1-containing protein. (156 aa)    
Predicted Functional Partners:
SFA55594.1
Uncharacterized domain 1-containing protein.
 
  
 0.734
SFA44571.1
Hypothetical protein.
  
 
  0.688
SFA40913.1
Ferredoxin-NADP reductase.
  
 
  0.678
SFA55945.1
Ferredoxin-NADP reductase.
  
 
  0.678
SFA61096.1
Ferredoxin-NADP reductase.
  
 
  0.678
SFA62791.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
  
 
  0.678
SFA64348.1
Vanillate O-demethylase ferredoxin subunit.
  
 
  0.678
SFA64532.1
A-factor biosynthesis hotdog domain-containing protein; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
  
 0.556
SFA39288.1
Enhancing lycopene biosynthesis protein 2; Displays glyoxalase activity, catalyzing the conversion of glyoxal to glycolate; Belongs to the peptidase C56 family.
  
    0.555
SFA55567.1
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase.
 
 
 0.546
Your Current Organism:
Pseudomonas otitidis
NCBI taxonomy Id: 319939
Other names: DSM 17224, P. otitidis, Pseudomonas otitidis Clark et al. 2006, strain MCC10330
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.