STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFA48259.1Putrescine transport system substrate-binding protein. (361 aa)    
Predicted Functional Partners:
SFA39746.1
Putrescine transport system permease protein.
 
 0.905
SFA39737.1
Putrescine transport system permease protein.
 
 
 0.902
SFA39398.1
Spermidine/putrescine transport system permease protein.
 
 0.899
potA-2
Putrescine transport system ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
 
 
 0.893
SFA39920.1
Spermidine/putrescine transport system permease protein.
 
 0.882
SFA39391.1
Spermidine/putrescine transport system permease protein.
 
 
 0.864
SFA39924.1
Spermidine/putrescine transport system permease protein.
 
 
 0.853
SFA55498.1
Putative spermidine/putrescine transport system permease protein.
 
 
 0.793
SFA42010.1
Putative spermidine/putrescine transport system permease protein.
 
 
 0.730
SFA64262.1
Putative spermidine/putrescine transport system permease protein.
 
 0.717
Your Current Organism:
Pseudomonas otitidis
NCBI taxonomy Id: 319939
Other names: DSM 17224, P. otitidis, Pseudomonas otitidis Clark et al. 2006, strain MCC10330
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.