Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFA39142.1 | cysZ | SAMN05216263_10198 | SAMN05216263_11018 | Uroporphyrin-3 C-methyltransferase. | CysZ protein; High affinity, high specificity proton-dependent sulfate transporter, which mediates sulfate uptake. Provides the sulfur source for the cysteine synthesis pathway; Belongs to the CysZ family. | 0.401 |
SFA61816.1 | SFA61820.1 | SAMN05216263_11017 | SAMN05216263_11019 | Glycosyltransferase involved in cell wall bisynthesis. | Thioredoxin reductase (NADPH). | 0.428 |
SFA61816.1 | cysZ | SAMN05216263_11017 | SAMN05216263_11018 | Glycosyltransferase involved in cell wall bisynthesis. | CysZ protein; High affinity, high specificity proton-dependent sulfate transporter, which mediates sulfate uptake. Provides the sulfur source for the cysteine synthesis pathway; Belongs to the CysZ family. | 0.591 |
SFA61820.1 | SFA61816.1 | SAMN05216263_11019 | SAMN05216263_11017 | Thioredoxin reductase (NADPH). | Glycosyltransferase involved in cell wall bisynthesis. | 0.428 |
SFA61820.1 | cysZ | SAMN05216263_11019 | SAMN05216263_11018 | Thioredoxin reductase (NADPH). | CysZ protein; High affinity, high specificity proton-dependent sulfate transporter, which mediates sulfate uptake. Provides the sulfur source for the cysteine synthesis pathway; Belongs to the CysZ family. | 0.517 |
cysZ | SFA39142.1 | SAMN05216263_11018 | SAMN05216263_10198 | CysZ protein; High affinity, high specificity proton-dependent sulfate transporter, which mediates sulfate uptake. Provides the sulfur source for the cysteine synthesis pathway; Belongs to the CysZ family. | Uroporphyrin-3 C-methyltransferase. | 0.401 |
cysZ | SFA61816.1 | SAMN05216263_11018 | SAMN05216263_11017 | CysZ protein; High affinity, high specificity proton-dependent sulfate transporter, which mediates sulfate uptake. Provides the sulfur source for the cysteine synthesis pathway; Belongs to the CysZ family. | Glycosyltransferase involved in cell wall bisynthesis. | 0.591 |
cysZ | SFA61820.1 | SAMN05216263_11018 | SAMN05216263_11019 | CysZ protein; High affinity, high specificity proton-dependent sulfate transporter, which mediates sulfate uptake. Provides the sulfur source for the cysteine synthesis pathway; Belongs to the CysZ family. | Thioredoxin reductase (NADPH). | 0.517 |