STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFA66770.1Hypothetical protein; Catalyzes the oxidation of the 1,2-dihydro- and 1,6- dihydro- isomeric forms of beta-NAD(P) back to beta-NAD(P)+. May serve to protect primary metabolism dehydrogenases from inhibition by the 1,2-dihydro- and 1,6-dihydro-beta-NAD(P) isomers; Belongs to the bacterial renalase family. (327 aa)    
Predicted Functional Partners:
hemH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
    
 0.880
SFA65843.1
Magnesium chelatase subunit I.
  
  
  0.708
SFA64265.1
Spermidine dehydrogenase.
     
 0.703
SFA45510.1
Deoxyribodipyrimidine photolyase-related protein.
 
     0.658
SFA66780.1
Short-chain dehydrogenase.
 
     0.646
SFA66784.1
Hypothetical protein.
 
     0.630
SFA66782.1
Predicted NAD/FAD-binding protein.
 
     0.621
SFA66772.1
Uncharacterized conserved protein YbgA, DUF1722 family.
       0.620
SFA66778.1
SnoaL-like domain-containing protein.
 
     0.611
SFA66768.1
Hypothetical protein.
       0.567
Your Current Organism:
Pseudomonas otitidis
NCBI taxonomy Id: 319939
Other names: DSM 17224, P. otitidis, Pseudomonas otitidis Clark et al. 2006, strain MCC10330
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