Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OJG34287.1 | OJG35202.1 | RV00_GL000819 | RV00_GL003033 | Aspartate 4-decarboxylase. | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | 0.934 |
OJG34287.1 | OJG35791.1 | RV00_GL000819 | RV00_GL002545 | Aspartate 4-decarboxylase. | Hypothetical protein; Belongs to the aspartokinase family. | 0.879 |
OJG34287.1 | OJG35795.1 | RV00_GL000819 | RV00_GL002549 | Aspartate 4-decarboxylase. | L-asparaginase. | 0.867 |
OJG34287.1 | OJG36450.1 | RV00_GL000819 | RV00_GL001809 | Aspartate 4-decarboxylase. | Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family. | 0.862 |
OJG34287.1 | OJG36981.1 | RV00_GL000819 | RV00_GL001426 | Aspartate 4-decarboxylase. | Asparagine synthase (glutamine-hydrolyzing). | 0.856 |
OJG34287.1 | OJG37005.1 | RV00_GL000819 | RV00_GL001450 | Aspartate 4-decarboxylase. | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | 0.934 |
OJG34287.1 | OJG37394.1 | RV00_GL000819 | RV00_GL000351 | Aspartate 4-decarboxylase. | Hypothetical protein. | 0.933 |
OJG34287.1 | argG | RV00_GL000819 | RV00_GL002797 | Aspartate 4-decarboxylase. | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.883 |
OJG34287.1 | purA | RV00_GL000819 | RV00_GL000710 | Aspartate 4-decarboxylase. | Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | 0.870 |
OJG34287.1 | pyrB | RV00_GL000819 | RV00_GL001390 | Aspartate 4-decarboxylase. | Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.856 |
OJG35202.1 | OJG34287.1 | RV00_GL003033 | RV00_GL000819 | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | Aspartate 4-decarboxylase. | 0.934 |
OJG35202.1 | OJG35791.1 | RV00_GL003033 | RV00_GL002545 | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | Hypothetical protein; Belongs to the aspartokinase family. | 0.521 |
OJG35202.1 | OJG37005.1 | RV00_GL003033 | RV00_GL001450 | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | 0.999 |
OJG35202.1 | OJG37394.1 | RV00_GL003033 | RV00_GL000351 | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | Hypothetical protein. | 0.988 |
OJG35791.1 | OJG34287.1 | RV00_GL002545 | RV00_GL000819 | Hypothetical protein; Belongs to the aspartokinase family. | Aspartate 4-decarboxylase. | 0.879 |
OJG35791.1 | OJG35202.1 | RV00_GL002545 | RV00_GL003033 | Hypothetical protein; Belongs to the aspartokinase family. | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | 0.521 |
OJG35791.1 | OJG35795.1 | RV00_GL002545 | RV00_GL002549 | Hypothetical protein; Belongs to the aspartokinase family. | L-asparaginase. | 0.917 |
OJG35791.1 | OJG36981.1 | RV00_GL002545 | RV00_GL001426 | Hypothetical protein; Belongs to the aspartokinase family. | Asparagine synthase (glutamine-hydrolyzing). | 0.949 |
OJG35791.1 | OJG37005.1 | RV00_GL002545 | RV00_GL001450 | Hypothetical protein; Belongs to the aspartokinase family. | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | 0.521 |
OJG35791.1 | OJG37394.1 | RV00_GL002545 | RV00_GL000351 | Hypothetical protein; Belongs to the aspartokinase family. | Hypothetical protein. | 0.680 |
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