STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OJG36341.1AraC family transcriptional regulator. (340 aa)    
Predicted Functional Partners:
OJG35949.1
Hypothetical protein.
 
 
 0.903
OJG37005.1
Pyruvate:ferredoxin (flavodoxin) oxidoreductase.
    
 0.857
OJG35202.1
Pyruvate:ferredoxin (flavodoxin) oxidoreductase.
    
 0.857
OJG37394.1
Hypothetical protein.
    
  0.841
OJG37535.1
Histidine kinase.
  
  0.787
OJG36663.1
Hypothetical protein.
 
  
  0.771
OJG36095.1
Hypothetical protein.
 
  
  0.769
OJG35444.1
Hypothetical protein.
 
 
 0.762
OJG37534.1
Hypothetical protein.
 
  
0.717
OJG36668.1
Hypothetical protein.
 
  
0.714
Your Current Organism:
Enterococcus devriesei
NCBI taxonomy Id: 319970
Other names: CCM 7299, CCUG 37865, DSM 22802, E. devriesei, Enterococcus devriesei Svec et al. 2005, LMG 14595, LMG:14595
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.