Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OJG35092.1 | OJG35093.1 | RV00_GL003111 | RV00_GL003112 | Hypothetical protein. | Hypothetical protein. | 0.615 |
OJG35092.1 | OJG35094.1 | RV00_GL003111 | RV00_GL003113 | Hypothetical protein. | DrrB family ABC transporter efflux protein. | 0.506 |
OJG35093.1 | OJG35092.1 | RV00_GL003112 | RV00_GL003111 | Hypothetical protein. | Hypothetical protein. | 0.615 |
OJG35093.1 | OJG35094.1 | RV00_GL003112 | RV00_GL003113 | Hypothetical protein. | DrrB family ABC transporter efflux protein. | 0.983 |
OJG35093.1 | OJG35750.1 | RV00_GL003112 | RV00_GL002504 | Hypothetical protein. | Hypothetical protein. | 0.858 |
OJG35093.1 | OJG35931.1 | RV00_GL003112 | RV00_GL002075 | Hypothetical protein. | Hypothetical protein. | 0.830 |
OJG35093.1 | OJG36593.1 | RV00_GL003112 | RV00_GL001952 | Hypothetical protein. | Glycine betaine transport ATP-binding protein OpuAA. | 0.692 |
OJG35093.1 | OJG36861.1 | RV00_GL003112 | RV00_GL001306 | Hypothetical protein. | Hypothetical protein. | 0.830 |
OJG35093.1 | atpA-2 | RV00_GL003112 | RV00_GL002516 | Hypothetical protein. | ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | 0.669 |
OJG35093.1 | atpC | RV00_GL003112 | RV00_GL002513 | Hypothetical protein. | ATP synthase epsilon chain; Produces ATP from ADP in the presence of a proton gradient across the membrane. | 0.650 |
OJG35093.1 | atpD-2 | RV00_GL003112 | RV00_GL002514 | Hypothetical protein. | ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits. | 0.685 |
OJG35093.1 | atpG | RV00_GL003112 | RV00_GL002515 | Hypothetical protein. | ATP synthase gamma chain; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex. | 0.666 |
OJG35094.1 | OJG35092.1 | RV00_GL003113 | RV00_GL003111 | DrrB family ABC transporter efflux protein. | Hypothetical protein. | 0.506 |
OJG35094.1 | OJG35093.1 | RV00_GL003113 | RV00_GL003112 | DrrB family ABC transporter efflux protein. | Hypothetical protein. | 0.983 |
OJG35750.1 | OJG35093.1 | RV00_GL002504 | RV00_GL003112 | Hypothetical protein. | Hypothetical protein. | 0.858 |
OJG35931.1 | OJG35093.1 | RV00_GL002075 | RV00_GL003112 | Hypothetical protein. | Hypothetical protein. | 0.830 |
OJG36593.1 | OJG35093.1 | RV00_GL001952 | RV00_GL003112 | Glycine betaine transport ATP-binding protein OpuAA. | Hypothetical protein. | 0.692 |
OJG36861.1 | OJG35093.1 | RV00_GL001306 | RV00_GL003112 | Hypothetical protein. | Hypothetical protein. | 0.830 |
atpA-2 | OJG35093.1 | RV00_GL002516 | RV00_GL003112 | ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | Hypothetical protein. | 0.669 |
atpA-2 | atpC | RV00_GL002516 | RV00_GL002513 | ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | ATP synthase epsilon chain; Produces ATP from ADP in the presence of a proton gradient across the membrane. | 0.999 |
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