OLU09952.1 protein (Achromobacter denitrificans)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

OLU09952.1

Peptide ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (519 aa)

Predicted Functional Partners:

OLU09950.1

0.842

OLU09951.1

0.841

OLU08853.1

0.632

OLU10393.1

0.629

OLU08854.1

0.617

BVK87_00180

0.558

OLU10263.1

0.546

OLU08838.1

0.544

OLU08857.1

0.538

OLU08839.1

0.537

Your Current Organism:

Achromobacter denitrificans

NCBI taxonomy Id: 32002
Other names: A. denitrificans, ATCC 15173, Achromobacter xylosoxidans subsp. denitrificans, Alcaligenes denitrificans, Alcaligenes denitrificans denitrificans, Alcaligenes denitrificans subsp. denitrificans, Alcaligenes xylosoxidans subsp. denitrificans, Alcaligenes xylosoxydans denitrificans, CCUG 407, CIP 77.15, DSM 30026, IFO 15125, JCM 5490, JCM 9657, NBRC 15125, NCTC 8582

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BVK87_00180	OLU08838.1	BVK87_00180	BVK87_08310	ABC transporter ATP-binding protein; Incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.855
BVK87_00180	OLU08853.1	BVK87_00180	BVK87_08390	ABC transporter ATP-binding protein; Incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.853
BVK87_00180	OLU08857.1	BVK87_00180	BVK87_08410	ABC transporter ATP-binding protein; Incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.607
BVK87_00180	OLU09951.1	BVK87_00180	BVK87_02480	ABC transporter ATP-binding protein; Incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.854
BVK87_00180	OLU09952.1	BVK87_00180	BVK87_02485	ABC transporter ATP-binding protein; Incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.558
BVK87_00180	OLU10263.1	BVK87_00180	BVK87_00185	ABC transporter ATP-binding protein; Incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.965
OLU08838.1	BVK87_00180	BVK87_08310	BVK87_00180	Peptide ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter ATP-binding protein; Incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.855
OLU08838.1	OLU08839.1	BVK87_08310	BVK87_08315	Peptide ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.966
OLU08838.1	OLU08854.1	BVK87_08310	BVK87_08395	Peptide ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.850
OLU08838.1	OLU08857.1	BVK87_08310	BVK87_08410	Peptide ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.540
OLU08838.1	OLU09950.1	BVK87_08310	BVK87_02475	Peptide ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.855
OLU08838.1	OLU09952.1	BVK87_08310	BVK87_02485	Peptide ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.544
OLU08838.1	OLU10393.1	BVK87_08310	BVK87_00910	Peptide ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.856
OLU08839.1	OLU08838.1	BVK87_08315	BVK87_08310	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.966
OLU08839.1	OLU08853.1	BVK87_08315	BVK87_08390	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.853
OLU08839.1	OLU08857.1	BVK87_08315	BVK87_08410	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.577
OLU08839.1	OLU09951.1	BVK87_08315	BVK87_02480	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.855
OLU08839.1	OLU09952.1	BVK87_08315	BVK87_02485	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.537
OLU08839.1	OLU10263.1	BVK87_08315	BVK87_00185	Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.	Peptide ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.856
OLU08853.1	BVK87_00180	BVK87_08390	BVK87_00180	Peptide ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter ATP-binding protein; Incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.853

page 1 of 4

Server load: low (14%) [HD]

Permalink

Network

Neighborhood

Experiments

Fusion

Databases

Co-occurrence

Textmining

Co-expression

© STRING Consortium 2026

Credits

Access

Info

About