STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OLU09562.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (124 aa)    
Predicted Functional Partners:
OLU09563.1
Thiolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.970
OLU09564.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.904
OLU09128.1
Thiolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.874
OLU08555.1
Thiolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.874
OLU05073.1
Thiolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.874
OLU07761.1
Thiolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.873
OLU01711.1
Thiolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.873
OLU07675.1
acetyl-CoA acetyltransferase; Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.865
OLU09595.1
3-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.845
OLU10167.1
Thiolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.807
Your Current Organism:
Achromobacter denitrificans
NCBI taxonomy Id: 32002
Other names: A. denitrificans, ATCC 15173, Achromobacter xylosoxidans subsp. denitrificans, Alcaligenes denitrificans, Alcaligenes denitrificans denitrificans, Alcaligenes denitrificans subsp. denitrificans, Alcaligenes xylosoxidans subsp. denitrificans, Alcaligenes xylosoxydans denitrificans, CCUG 407, CIP 77.15, DSM 30026, IFO 15125, JCM 5490, JCM 9657, NBRC 15125, NCTC 8582
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