STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OLU08236.1Sulfite oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (408 aa)    
Predicted Functional Partners:
OLU08237.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.926
OLU05593.1
Sulfite:cytochrome C oxidoreductase subunit B; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.805
msrQ
Sulfoxide reductase heme-binding subunit YedZ; Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalyti [...]
  
  
 0.649
OLU00780.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.613
OLU07200.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.602
OLU09999.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.432
ccoP
Cytochrome c oxidase, cbb3-type subunit III; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
   
 
 0.426
OLU08235.1
Protein involved in meta-pathway of phenol degradation; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.418
metC
Cystathionine beta-lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
 0.413
metC-2
Cystathionine beta-lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
 0.413
Your Current Organism:
Achromobacter denitrificans
NCBI taxonomy Id: 32002
Other names: A. denitrificans, ATCC 15173, Achromobacter xylosoxidans subsp. denitrificans, Alcaligenes denitrificans, Alcaligenes denitrificans denitrificans, Alcaligenes denitrificans subsp. denitrificans, Alcaligenes xylosoxidans subsp. denitrificans, Alcaligenes xylosoxydans denitrificans, CCUG 407, CIP 77.15, DSM 30026, IFO 15125, JCM 5490, JCM 9657, NBRC 15125, NCTC 8582
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