Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| OLU07255.1 | OLU07259.1 | BVK87_16515 | BVK87_16525 | SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Lytic transglycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.773 |
| OLU07255.1 | dnaQ | BVK87_16515 | BVK87_16495 | SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA polymerase III subunit epsilon; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'- 5' exonuclease. | 0.495 |
| OLU07255.1 | gloB | BVK87_16515 | BVK87_16520 | SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hydroxyacylglutathione hydrolase; Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl- glutathione to form glutathione and D-lactic acid. | 0.807 |
| OLU07255.1 | rnhA | BVK87_16515 | BVK87_16510 | SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Ribonuclease HI; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase H family. | 0.916 |
| OLU07259.1 | OLU07255.1 | BVK87_16525 | BVK87_16515 | Lytic transglycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology. | SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.773 |
| OLU07259.1 | dnaQ | BVK87_16525 | BVK87_16495 | Lytic transglycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA polymerase III subunit epsilon; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'- 5' exonuclease. | 0.411 |
| OLU07259.1 | gloB | BVK87_16525 | BVK87_16520 | Lytic transglycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hydroxyacylglutathione hydrolase; Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl- glutathione to form glutathione and D-lactic acid. | 0.896 |
| OLU07259.1 | polA | BVK87_16525 | BVK87_28300 | Lytic transglycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.457 |
| OLU07259.1 | rnhA | BVK87_16525 | BVK87_16510 | Lytic transglycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Ribonuclease HI; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase H family. | 0.611 |
| OLU07737.1 | rnhA | BVK87_14035 | BVK87_16510 | DUF2325 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Ribonuclease HI; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase H family. | 0.606 |
| dnaQ | OLU07255.1 | BVK87_16495 | BVK87_16515 | DNA polymerase III subunit epsilon; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'- 5' exonuclease. | SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.495 |
| dnaQ | OLU07259.1 | BVK87_16495 | BVK87_16525 | DNA polymerase III subunit epsilon; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'- 5' exonuclease. | Lytic transglycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.411 |
| dnaQ | dnaX | BVK87_16495 | BVK87_20460 | DNA polymerase III subunit epsilon; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'- 5' exonuclease. | DNA polymerase III, subunit gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | 0.868 |
| dnaQ | gloB | BVK87_16495 | BVK87_16520 | DNA polymerase III subunit epsilon; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'- 5' exonuclease. | Hydroxyacylglutathione hydrolase; Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl- glutathione to form glutathione and D-lactic acid. | 0.531 |
| dnaQ | polA | BVK87_16495 | BVK87_28300 | DNA polymerase III subunit epsilon; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'- 5' exonuclease. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.652 |
| dnaQ | rnhA | BVK87_16495 | BVK87_16510 | DNA polymerase III subunit epsilon; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'- 5' exonuclease. | Ribonuclease HI; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase H family. | 0.977 |
| dnaX | dnaQ | BVK87_20460 | BVK87_16495 | DNA polymerase III, subunit gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | DNA polymerase III subunit epsilon; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'- 5' exonuclease. | 0.868 |
| dnaX | polA | BVK87_20460 | BVK87_28300 | DNA polymerase III, subunit gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.590 |
| dnaX | rnhA | BVK87_20460 | BVK87_16510 | DNA polymerase III, subunit gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | Ribonuclease HI; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase H family. | 0.721 |
| dnaX | ssb | BVK87_20460 | BVK87_16815 | DNA polymerase III, subunit gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | Single-stranded DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.850 |
page 1 of 3