OLU05783.1 protein (Achromobacter denitrificans)

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second shell of interactors

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Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

OLU05783.1

ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (329 aa)

Predicted Functional Partners:

OLU05784.1

0.773

OLU09138.1

0.604

OLU07207.1

0.604

OLU06459.1

0.587

OLU07213.1

0.570

OLU04473.1

0.569

OLU05785.1

0.568

OLU05782.1

0.540

Your Current Organism:

Achromobacter denitrificans

NCBI taxonomy Id: 32002
Other names: A. denitrificans, ATCC 15173, Achromobacter xylosoxidans subsp. denitrificans, Alcaligenes denitrificans, Alcaligenes denitrificans denitrificans, Alcaligenes denitrificans subsp. denitrificans, Alcaligenes xylosoxidans subsp. denitrificans, Alcaligenes xylosoxydans denitrificans, CCUG 407, CIP 77.15, DSM 30026, IFO 15125, JCM 5490, JCM 9657, NBRC 15125, NCTC 8582

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
OLU04473.1	OLU05783.1	BVK87_23555	BVK87_21290	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.569
OLU05782.1	OLU05783.1	BVK87_21285	BVK87_21290	LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.540
OLU05782.1	OLU05784.1	BVK87_21285	BVK87_21295	LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family.	N-formylglutamate amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.640
OLU05782.1	OLU05785.1	BVK87_21285	BVK87_21300	LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.410
OLU05783.1	OLU04473.1	BVK87_21290	BVK87_23555	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.569
OLU05783.1	OLU05782.1	BVK87_21290	BVK87_21285	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family.	0.540
OLU05783.1	OLU05784.1	BVK87_21290	BVK87_21295	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	N-formylglutamate amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.773
OLU05783.1	OLU05785.1	BVK87_21290	BVK87_21300	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.568
OLU05783.1	OLU06459.1	BVK87_21290	BVK87_20040	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.587
OLU05783.1	OLU07207.1	BVK87_21290	BVK87_16260	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.604
OLU05783.1	OLU07213.1	BVK87_21290	BVK87_16290	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.570
OLU05783.1	OLU09138.1	BVK87_21290	BVK87_07000	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.604
OLU05784.1	OLU05782.1	BVK87_21295	BVK87_21285	N-formylglutamate amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family.	0.640
OLU05784.1	OLU05783.1	BVK87_21295	BVK87_21290	N-formylglutamate amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.773
OLU05784.1	OLU05785.1	BVK87_21295	BVK87_21300	N-formylglutamate amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.568
OLU05785.1	OLU05782.1	BVK87_21300	BVK87_21285	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family.	0.410
OLU05785.1	OLU05783.1	BVK87_21300	BVK87_21290	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.568
OLU05785.1	OLU05784.1	BVK87_21300	BVK87_21295	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	N-formylglutamate amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.568
OLU06459.1	OLU05783.1	BVK87_20040	BVK87_21290	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.587
OLU07207.1	OLU05783.1	BVK87_16260	BVK87_21290	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.604

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Network Stats

number of nodes:

3

number of edges:

3

average node degree:

2

avg. local clustering coefficient:

1

expected number of edges:

2

PPI enrichment p-value:

0.211

your network does not have significantly more
interactions than expected (what does that mean?)

Functional enrichments in your networkNote: some enrichments may be expected here (why?)
disable highlight explain columns

Molecular Function (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0004691

cAMP-dependent protein kinase activity

2 of 4

2.77

0.9

0.0236

Local Network Cluster (STRING)

cluster

description

count in network

strength

signal

false discovery rate

CL:18772

Mixed, incl. Synaptotagmin-like mitochondrial-lipid-binding domain, and tRNA-dihydrouridine synthase, conserved site

3 of 7

2.71

2.1

0.00014

CL:2622

CREB1 phosphorylation through the activation of Adenylate Cyclase, and Urea transport

2 of 10

2.38

0.78

0.0383

KEGG Pathways

pathway

description

count in network

strength

signal

false discovery rate

map04140

Autophagy - animal

3 of 141

1.4

0.67

0.0390

Reactome Pathways

pathway

description

count in network

strength

signal

false discovery rate

MAP-442720

CREB1 phosphorylation through the activation of Adenylate Cyclase

3 of 7

2.71

2.21

8.53e-05

MAP-438064

Post NMDA receptor activation events

3 of 19

2.27

1.76

0.00047

MAP-111931

PKA-mediated phosphorylation of CREB

3 of 18

2.3

1.76

0.00047

MAP-1489509

DAG and IP3 signaling

3 of 26

2.14

1.66

0.00064

MAP-111997

CaM pathway

3 of 26

2.14

1.66

0.00064

(more ...)

Annotated Keywords (UniProt)

keyword

description

count in network

strength

signal

false discovery rate

KW-0446

Lipid-binding

3 of 8

2.65

2.52

2.11e-05

KW-0445

Lipid transport

3 of 15

2.38

2.26

5.20e-05

Protein Domains and Features (InterPro)

domain

description

count in network

strength

signal

false discovery rate

IPR031468

Synaptotagmin-like mitochondrial-lipid-binding domain

3 of 4

2.95

2.26

7.73e-05

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