Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OLU00988.1 | OLU03409.1 | BVK87_28510 | BVK87_24690 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | EamA family transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.413 |
OLU03408.1 | OLU03409.1 | BVK87_24685 | BVK87_24690 | 6-phosphofructokinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | EamA family transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.517 |
OLU03409.1 | OLU00988.1 | BVK87_24690 | BVK87_28510 | EamA family transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.413 |
OLU03409.1 | OLU03408.1 | BVK87_24690 | BVK87_24685 | EamA family transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 6-phosphofructokinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.517 |
OLU03409.1 | flhC | BVK87_24690 | BVK87_29560 | EamA family transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | Transcriptional regulator FlhC; Functions in complex with FlhD as a master transcriptional regulator that regulates transcription of several flagellar and non- flagellar operons by binding to their promoter region. Activates expression of class 2 flagellar genes, including fliA, which is a flagellum-specific sigma factor that turns on the class 3 genes. Also regulates genes whose products function in a variety of physiological pathways; Belongs to the FlhC family. | 0.413 |
OLU03409.1 | flhD | BVK87_24690 | BVK87_29555 | EamA family transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | Flagellar transcriptional activator FlhD; Functions in complex with FlhC as a master transcriptional regulator that regulates transcription of several flagellar and non- flagellar operons by binding to their promoter region. Activates expression of class 2 flagellar genes, including fliA, which is a flagellum-specific sigma factor that turns on the class 3 genes. Also regulates genes whose products function in a variety of physiological pathways; Belongs to the FlhD family. | 0.417 |
flhC | OLU03409.1 | BVK87_29560 | BVK87_24690 | Transcriptional regulator FlhC; Functions in complex with FlhD as a master transcriptional regulator that regulates transcription of several flagellar and non- flagellar operons by binding to their promoter region. Activates expression of class 2 flagellar genes, including fliA, which is a flagellum-specific sigma factor that turns on the class 3 genes. Also regulates genes whose products function in a variety of physiological pathways; Belongs to the FlhC family. | EamA family transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.413 |
flhC | flhD | BVK87_29560 | BVK87_29555 | Transcriptional regulator FlhC; Functions in complex with FlhD as a master transcriptional regulator that regulates transcription of several flagellar and non- flagellar operons by binding to their promoter region. Activates expression of class 2 flagellar genes, including fliA, which is a flagellum-specific sigma factor that turns on the class 3 genes. Also regulates genes whose products function in a variety of physiological pathways; Belongs to the FlhC family. | Flagellar transcriptional activator FlhD; Functions in complex with FlhC as a master transcriptional regulator that regulates transcription of several flagellar and non- flagellar operons by binding to their promoter region. Activates expression of class 2 flagellar genes, including fliA, which is a flagellum-specific sigma factor that turns on the class 3 genes. Also regulates genes whose products function in a variety of physiological pathways; Belongs to the FlhD family. | 0.999 |
flhD | OLU03409.1 | BVK87_29555 | BVK87_24690 | Flagellar transcriptional activator FlhD; Functions in complex with FlhC as a master transcriptional regulator that regulates transcription of several flagellar and non- flagellar operons by binding to their promoter region. Activates expression of class 2 flagellar genes, including fliA, which is a flagellum-specific sigma factor that turns on the class 3 genes. Also regulates genes whose products function in a variety of physiological pathways; Belongs to the FlhD family. | EamA family transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.417 |
flhD | flhC | BVK87_29555 | BVK87_29560 | Flagellar transcriptional activator FlhD; Functions in complex with FlhC as a master transcriptional regulator that regulates transcription of several flagellar and non- flagellar operons by binding to their promoter region. Activates expression of class 2 flagellar genes, including fliA, which is a flagellum-specific sigma factor that turns on the class 3 genes. Also regulates genes whose products function in a variety of physiological pathways; Belongs to the FlhD family. | Transcriptional regulator FlhC; Functions in complex with FlhD as a master transcriptional regulator that regulates transcription of several flagellar and non- flagellar operons by binding to their promoter region. Activates expression of class 2 flagellar genes, including fliA, which is a flagellum-specific sigma factor that turns on the class 3 genes. Also regulates genes whose products function in a variety of physiological pathways; Belongs to the FlhC family. | 0.999 |