STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OLU00037.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (133 aa)    
Predicted Functional Partners:
OLU00036.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.975
OLU00038.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.940
OLU00035.1
SepL/TyeA/HrpJ family type III secretion system gatekeeper; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.884
OLU00039.1
EscV/YscV/HrcV family type III secretion system export apparatus protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.844
OLU00040.1
EscD/YscD/HrpQ family type III secretion system inner membrane ring protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.726
OLU00024.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.707
OLU00028.1
CesD/SycD/LcrH family type III secretion system chaperone; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.681
OLU00027.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.679
OLU00033.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.663
OLU00025.1
EscJ/YscJ/HrcJ family type III secretion inner membrane ring protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.603
Your Current Organism:
Achromobacter denitrificans
NCBI taxonomy Id: 32002
Other names: A. denitrificans, ATCC 15173, Achromobacter xylosoxidans subsp. denitrificans, Alcaligenes denitrificans, Alcaligenes denitrificans denitrificans, Alcaligenes denitrificans subsp. denitrificans, Alcaligenes xylosoxidans subsp. denitrificans, Alcaligenes xylosoxydans denitrificans, CCUG 407, CIP 77.15, DSM 30026, IFO 15125, JCM 5490, JCM 9657, NBRC 15125, NCTC 8582
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.