STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
efeUFTR1 family iron permease. (664 aa)    
Predicted Functional Partners:
tpd
C4-dicarboxylate-binding periplasmic protein.
 
  
 0.987
CZE49983.1
Integral membrane protein.
 
  
 0.956
macB_1
Integral membrane protein-permease%2C involved in lipoprotein release.
 
    0.931
macB_2
ABC transport permease.
 
    0.925
lolD_1
Macrolide export ATP-binding/permease protein MacB.
 
    0.912
futA1
Iron ABC transporter periplasmic iron-binding protein.
   
    0.752
yfeX
Dyp-type peroxidase.
  
  
 0.719
macB_3
Macrolide export ATP-binding/permease protein MacB.
 
  
 0.652
CZE49979.1
Redoxin superfamily protein.
 
   
 0.649
yusV
Ferrichrome transport ATP-binding protein FhuC.
  
  
 0.612
Your Current Organism:
Campylobacter fetus
NCBI taxonomy Id: 32019
Other names: C. fetus subsp. fetus, Campylobacter fetus fetus, Campylobacter fetus subsp. fetus, Vibrio fetus subsp. intestinalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.