STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
paaKPhenylacetate-coenzyme A ligase. (431 aa)    
Predicted Functional Partners:
CZE50037.1
Acetolactate synthase 3 regulatory subunit.
 
   0.960
gabD
Succinate-semialdehyde dehydrogenase(NADP+).
  
 0.939
CZE50034.1
Indolepyruvate ferredoxin oxidoreductase.
 
    0.933
CZE50035.1
Indolepyruvate oxidoreductase subunit beta.
 
    0.918
fixN
Cytochrome C oxidase heme b and copper-binding subunit%2C membrane-bound.
    
 0.841
etk
Chain length determinant protein.
    
  0.841
aas_2
3-phosphoshikimate 1-carboxyvinyltransferase.
    
 0.733
gatA
aspartyl/glutamyl-tRNA amidotransferase subunit A.
    
  0.565
cysE
Serine O-acetyltransferase.
    
  0.534
pheA
Chorismate mutase/prephenate dehydratase.
     
 0.495
Your Current Organism:
Campylobacter fetus
NCBI taxonomy Id: 32019
Other names: C. fetus subsp. fetus, Campylobacter fetus fetus, Campylobacter fetus subsp. fetus, Vibrio fetus subsp. intestinalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.