Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CZE50237.1 | CZE50241.1 | ERS672215_00550 | ERS672215_00554 | FdhC protein. | Putative recombination protein RecO. | 0.573 |
CZE50237.1 | accD | ERS672215_00550 | ERS672215_00553 | FdhC protein. | acetyl-CoA carboxylase subunit beta; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family. | 0.790 |
CZE50237.1 | dksA | ERS672215_00550 | ERS672215_00551 | FdhC protein. | DnaK suppressor protein. | 0.790 |
CZE50237.1 | dusB | ERS672215_00550 | ERS672215_00549 | FdhC protein. | tRNA-dihydrouridine synthase B. | 0.800 |
CZE50237.1 | rlmH | ERS672215_00550 | ERS672215_00552 | FdhC protein. | Ribosomal RNA large subunit methyltransferase H. | 0.790 |
CZE50241.1 | CZE50237.1 | ERS672215_00554 | ERS672215_00550 | Putative recombination protein RecO. | FdhC protein. | 0.573 |
CZE50241.1 | accD | ERS672215_00554 | ERS672215_00553 | Putative recombination protein RecO. | acetyl-CoA carboxylase subunit beta; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family. | 0.579 |
CZE50241.1 | dksA | ERS672215_00554 | ERS672215_00551 | Putative recombination protein RecO. | DnaK suppressor protein. | 0.582 |
CZE50241.1 | dusB | ERS672215_00554 | ERS672215_00549 | Putative recombination protein RecO. | tRNA-dihydrouridine synthase B. | 0.574 |
CZE50241.1 | hisIE | ERS672215_00554 | ERS672215_00692 | Putative recombination protein RecO. | phosphoribosyl-AMP pyrophosphatase. | 0.465 |
CZE50241.1 | polA | ERS672215_00554 | ERS672215_00599 | Putative recombination protein RecO. | DNA polymerase I. | 0.537 |
CZE50241.1 | recR | ERS672215_00554 | ERS672215_01723 | Putative recombination protein RecO. | Recombination protein RecR. | 0.956 |
CZE50241.1 | rlmH | ERS672215_00554 | ERS672215_00552 | Putative recombination protein RecO. | Ribosomal RNA large subunit methyltransferase H. | 0.579 |
CZE50241.1 | ssb | ERS672215_00554 | ERS672215_00479 | Putative recombination protein RecO. | Single-stranded DNA-binding protein. | 0.554 |
CZE50241.1 | topA | ERS672215_00554 | ERS672215_00119 | Putative recombination protein RecO. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.566 |
accD | CZE50237.1 | ERS672215_00553 | ERS672215_00550 | acetyl-CoA carboxylase subunit beta; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family. | FdhC protein. | 0.790 |
accD | CZE50241.1 | ERS672215_00553 | ERS672215_00554 | acetyl-CoA carboxylase subunit beta; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family. | Putative recombination protein RecO. | 0.579 |
accD | dksA | ERS672215_00553 | ERS672215_00551 | acetyl-CoA carboxylase subunit beta; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family. | DnaK suppressor protein. | 0.800 |
accD | dusB | ERS672215_00553 | ERS672215_00549 | acetyl-CoA carboxylase subunit beta; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family. | tRNA-dihydrouridine synthase B. | 0.792 |
accD | polA | ERS672215_00553 | ERS672215_00599 | acetyl-CoA carboxylase subunit beta; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family. | DNA polymerase I. | 0.451 |
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