STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
palOmp18. (159 aa)    
Predicted Functional Partners:
tolB
Translocation protein TolB.
 
 0.950
tolQ_2
ExbBTolQ family transport protein.
 
     0.856
exbD_1
ExbDTolR family transport protein.
 
 
   0.848
CZE50249.1
TPR repeat-containing protein.
  
  
 0.822
yaeT
Outer membrane protein assembly complex%2C YaeT protein.
  
 
 
 0.802
exbD_2
Biopolymer transport ExbD protein.
 
 
   0.742
lolC
Lipoprotein release system transmembrane protein.
  
 
   0.739
exbB_1
Biopolymer transport ExbB protein.
 
     0.732
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
    
  0.725
slyD
Fkbp-type peptidyl-prolyl cis-trans isomerase slyd.
 
     0.694
Your Current Organism:
Campylobacter fetus
NCBI taxonomy Id: 32019
Other names: C. fetus subsp. fetus, Campylobacter fetus fetus, Campylobacter fetus subsp. fetus, Vibrio fetus subsp. intestinalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.