Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CZE49874.1 | folB | ERS672215_00179 | ERS672215_00624 | Putative deoxyribonucleotide triphosphate pyrophosphatase. | Dihydroneopterin aldolase. | 0.481 |
CZE49874.1 | folE | ERS672215_00179 | ERS672215_00762 | Putative deoxyribonucleotide triphosphate pyrophosphatase. | GTP cyclohydrolase I. | 0.768 |
CZE49874.1 | folK | ERS672215_00179 | ERS672215_00827 | Putative deoxyribonucleotide triphosphate pyrophosphatase. | 2-amino-4-hydroxy-6- hydroxymethyldihydropteridinepyrophosphokinase. | 0.502 |
CZE49874.1 | folP | ERS672215_00179 | ERS672215_00468 | Putative deoxyribonucleotide triphosphate pyrophosphatase. | Dihydropteroate synthase. | 0.512 |
CZE49874.1 | ribBA | ERS672215_00179 | ERS672215_01202 | Putative deoxyribonucleotide triphosphate pyrophosphatase. | Bifunctional 3%2C4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein. | 0.574 |
CZE49874.1 | ribD | ERS672215_00179 | ERS672215_00821 | Putative deoxyribonucleotide triphosphate pyrophosphatase. | Riboflavin biosynthesis protein RibD. | 0.509 |
CZE50400.1 | folB | ERS672215_00713 | ERS672215_00624 | Putative 6-pyruvoyl tetrahydrobiopterin synthase. | Dihydroneopterin aldolase. | 0.639 |
CZE50400.1 | folE | ERS672215_00713 | ERS672215_00762 | Putative 6-pyruvoyl tetrahydrobiopterin synthase. | GTP cyclohydrolase I. | 0.981 |
CZE51136.1 | barA | ERS672215_01480 | ERS672215_01728 | Diguanylate cyclase. | Sensor histidine kinase/response regulator. | 0.925 |
CZE51136.1 | folE | ERS672215_01480 | ERS672215_00762 | Diguanylate cyclase. | GTP cyclohydrolase I. | 0.750 |
barA | CZE51136.1 | ERS672215_01728 | ERS672215_01480 | Sensor histidine kinase/response regulator. | Diguanylate cyclase. | 0.925 |
barA | folE | ERS672215_01728 | ERS672215_00762 | Sensor histidine kinase/response regulator. | GTP cyclohydrolase I. | 0.752 |
barA | ribA | ERS672215_01728 | ERS672215_00901 | Sensor histidine kinase/response regulator. | GTP cyclohydrolase II. | 0.738 |
barA | ribBA | ERS672215_01728 | ERS672215_01202 | Sensor histidine kinase/response regulator. | Bifunctional 3%2C4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein. | 0.903 |
folB | CZE49874.1 | ERS672215_00624 | ERS672215_00179 | Dihydroneopterin aldolase. | Putative deoxyribonucleotide triphosphate pyrophosphatase. | 0.481 |
folB | CZE50400.1 | ERS672215_00624 | ERS672215_00713 | Dihydroneopterin aldolase. | Putative 6-pyruvoyl tetrahydrobiopterin synthase. | 0.639 |
folB | folE | ERS672215_00624 | ERS672215_00762 | Dihydroneopterin aldolase. | GTP cyclohydrolase I. | 0.953 |
folB | folK | ERS672215_00624 | ERS672215_00827 | Dihydroneopterin aldolase. | 2-amino-4-hydroxy-6- hydroxymethyldihydropteridinepyrophosphokinase. | 0.975 |
folB | folP | ERS672215_00624 | ERS672215_00468 | Dihydroneopterin aldolase. | Dihydropteroate synthase. | 0.953 |
folB | ribD | ERS672215_00624 | ERS672215_00821 | Dihydroneopterin aldolase. | Riboflavin biosynthesis protein RibD. | 0.547 |
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