Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CZE49805.1 | CZE49989.1 | ERS672215_00110 | ERS672215_00301 | Phospholipase A. | Plp4. | 0.596 |
CZE49805.1 | CZE50181.1 | ERS672215_00110 | ERS672215_00494 | Phospholipase A. | tRNA (guanine-N(1)-)-methyltransferase. | 0.476 |
CZE49805.1 | ompA | ERS672215_00110 | ERS672215_01711 | Phospholipase A. | Plp4. | 0.597 |
CZE49805.1 | yaeT | ERS672215_00110 | ERS672215_00809 | Phospholipase A. | Outer membrane protein assembly complex%2C YaeT protein. | 0.805 |
CZE49989.1 | CZE49805.1 | ERS672215_00301 | ERS672215_00110 | Plp4. | Phospholipase A. | 0.596 |
CZE49989.1 | CZE50181.1 | ERS672215_00301 | ERS672215_00494 | Plp4. | tRNA (guanine-N(1)-)-methyltransferase. | 0.777 |
CZE49989.1 | yaeT | ERS672215_00301 | ERS672215_00809 | Plp4. | Outer membrane protein assembly complex%2C YaeT protein. | 0.957 |
CZE50181.1 | CZE49805.1 | ERS672215_00494 | ERS672215_00110 | tRNA (guanine-N(1)-)-methyltransferase. | Phospholipase A. | 0.476 |
CZE50181.1 | CZE49989.1 | ERS672215_00494 | ERS672215_00301 | tRNA (guanine-N(1)-)-methyltransferase. | Plp4. | 0.777 |
CZE50181.1 | ompA | ERS672215_00494 | ERS672215_01711 | tRNA (guanine-N(1)-)-methyltransferase. | Plp4. | 0.777 |
CZE50181.1 | yaeT | ERS672215_00494 | ERS672215_00809 | tRNA (guanine-N(1)-)-methyltransferase. | Outer membrane protein assembly complex%2C YaeT protein. | 0.964 |
lolC | pal | ERS672215_01145 | ERS672215_00563 | Lipoprotein release system transmembrane protein. | Omp18. | 0.739 |
lolC | rpoC | ERS672215_01145 | ERS672215_00922 | Lipoprotein release system transmembrane protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.467 |
lolC | yaeT | ERS672215_01145 | ERS672215_00809 | Lipoprotein release system transmembrane protein. | Outer membrane protein assembly complex%2C YaeT protein. | 0.764 |
lpxD | yaeT | ERS672215_01414 | ERS672215_00809 | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase. | Outer membrane protein assembly complex%2C YaeT protein. | 0.787 |
ompA | CZE49805.1 | ERS672215_01711 | ERS672215_00110 | Plp4. | Phospholipase A. | 0.597 |
ompA | CZE50181.1 | ERS672215_01711 | ERS672215_00494 | Plp4. | tRNA (guanine-N(1)-)-methyltransferase. | 0.777 |
ompA | pal | ERS672215_01711 | ERS672215_00563 | Plp4. | Omp18. | 0.443 |
ompA | yaeT | ERS672215_01711 | ERS672215_00809 | Plp4. | Outer membrane protein assembly complex%2C YaeT protein. | 0.968 |
pal | lolC | ERS672215_00563 | ERS672215_01145 | Omp18. | Lipoprotein release system transmembrane protein. | 0.739 |
page 1 of 2