Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CZE50518.1 | CZE50519.1 | ERS672215_00839 | ERS672215_00840 | Lipoprotein. | Lipoprotein. | 0.979 |
CZE50518.1 | CZE50520.1 | ERS672215_00839 | ERS672215_00841 | Lipoprotein. | Outer membrane lipoprotein. | 0.971 |
CZE50518.1 | fhaC | ERS672215_00839 | ERS672215_00043 | Lipoprotein. | Putative hemolysin activation protein HecB. | 0.502 |
CZE50518.1 | lepA | ERS672215_00839 | ERS672215_00842 | Lipoprotein. | GTP-binding protein LepA; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner. | 0.520 |
CZE50518.1 | modE | ERS672215_00839 | ERS672215_00309 | Lipoprotein. | ModE family transcriptional regulator. | 0.400 |
CZE50519.1 | CZE50518.1 | ERS672215_00840 | ERS672215_00839 | Lipoprotein. | Lipoprotein. | 0.979 |
CZE50519.1 | CZE50520.1 | ERS672215_00840 | ERS672215_00841 | Lipoprotein. | Outer membrane lipoprotein. | 0.974 |
CZE50519.1 | CZE50525.1 | ERS672215_00840 | ERS672215_00846 | Lipoprotein. | Putative isomerase. | 0.402 |
CZE50519.1 | fhaC | ERS672215_00840 | ERS672215_00043 | Lipoprotein. | Putative hemolysin activation protein HecB. | 0.513 |
CZE50519.1 | lepA | ERS672215_00840 | ERS672215_00842 | Lipoprotein. | GTP-binding protein LepA; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner. | 0.520 |
CZE50519.1 | modE | ERS672215_00840 | ERS672215_00309 | Lipoprotein. | ModE family transcriptional regulator. | 0.424 |
CZE50520.1 | CZE50518.1 | ERS672215_00841 | ERS672215_00839 | Outer membrane lipoprotein. | Lipoprotein. | 0.971 |
CZE50520.1 | CZE50519.1 | ERS672215_00841 | ERS672215_00840 | Outer membrane lipoprotein. | Lipoprotein. | 0.974 |
CZE50520.1 | fhaC | ERS672215_00841 | ERS672215_00043 | Outer membrane lipoprotein. | Putative hemolysin activation protein HecB. | 0.514 |
CZE50520.1 | lepA | ERS672215_00841 | ERS672215_00842 | Outer membrane lipoprotein. | GTP-binding protein LepA; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner. | 0.533 |
CZE50525.1 | CZE50519.1 | ERS672215_00846 | ERS672215_00840 | Putative isomerase. | Lipoprotein. | 0.402 |
CZE50525.1 | lepA | ERS672215_00846 | ERS672215_00842 | Putative isomerase. | GTP-binding protein LepA; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner. | 0.406 |
fhaC | CZE50518.1 | ERS672215_00043 | ERS672215_00839 | Putative hemolysin activation protein HecB. | Lipoprotein. | 0.502 |
fhaC | CZE50519.1 | ERS672215_00043 | ERS672215_00840 | Putative hemolysin activation protein HecB. | Lipoprotein. | 0.513 |
fhaC | CZE50520.1 | ERS672215_00043 | ERS672215_00841 | Putative hemolysin activation protein HecB. | Outer membrane lipoprotein. | 0.514 |
page 1 of 2