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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hemBDelta-aminolevulinic acid dehydratase; Belongs to the ALAD family. (325 aa)    
Predicted Functional Partners:
hemC
Porphobilinogen deaminase.
 
 0.988
hemL
Glutamate-1-semialdehyde aminotransferase.
 
 
 0.978
hemD
uroporphyrinogen-III synthase.
  
 0.908
hemA
glutamyl-tRNA reductase.
 
  
 0.846
argF
Ornithine carbamoyltransferase.
  
    0.802
CZE50582.1
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase.
       0.800
lutA_1
Iron-sulfur cluster-binding domain-containing protein.
       0.800
hemN
Coproporphyrinogen III oxidase.
     
 0.789
CZE50585.1
Uncharacterised protein.
       0.773
hemE_1
Uroporphyrinogen decarboxylase.
 
 
 0.678
Your Current Organism:
Campylobacter fetus
NCBI taxonomy Id: 32019
Other names: C. fetus subsp. fetus, Campylobacter fetus fetus, Campylobacter fetus subsp. fetus, Vibrio fetus subsp. intestinalis
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