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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gabDSuccinate-semialdehyde dehydrogenase(NADP+). (475 aa)    
Predicted Functional Partners:
puuE
Acetylornithine aminotransferase / N-succinyl-L %2CL-diaminopimelate aminotransferase.
 0.981
nifJ
Pyruvate:ferredoxin (flavodoxin) oxidoreductase.
  
 0.951
cysK_1
Cysteine synthase A.
    
 0.943
paaK
Phenylacetate-coenzyme A ligase.
  
 0.939
pta
Phosphate acetyltransferase (phosphotransacetylase).
  
 
 0.890
aas_1
2-acyl-glycerophospho-ethanolamine acyltransferase.
  
 0.878
cfiA
Biotin/lipoyl attachment.
    
 0.875
CZE51096.1
Putative D-lactate dehydrogenase%2C Fe-S protein%2C FAD/FMN-containing protein.
  
 
 0.874
aas_2
3-phosphoshikimate 1-carboxyvinyltransferase.
  
 0.862
CZE49752.1
Iron-sulfur protein.
  
 
 0.860
Your Current Organism:
Campylobacter fetus
NCBI taxonomy Id: 32019
Other names: C. fetus subsp. fetus, Campylobacter fetus fetus, Campylobacter fetus subsp. fetus, Vibrio fetus subsp. intestinalis
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