STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sau3AIRType-2 restriction enzyme Sau3AI. (495 aa)    
Predicted Functional Partners:
hhaIM
Two-component sensor.
     0.980
trpS
tryptophanyl-tRNA synthetase; Catalyzes the attachment of tryptophan to tRNA(Trp). Belongs to the class-I aminoacyl-tRNA synthetase family.
     
 0.774
CZE50937.1
Uncharacterised protein.
       0.686
aroK
Shikimate kinase.
     
 0.644
engA
GTP-binding protein EngA.
       0.613
CZE50938.1
DNA methylase.
       0.551
haeIIIM_1
Two-component sensor.
 
     0.468
haeIIIM_2
Two-component sensor.
 
     0.466
CZE50931.1
Integral membrane protein.
       0.439
nusB
Transcription antitermination protein NusB.
       0.436
Your Current Organism:
Campylobacter fetus
NCBI taxonomy Id: 32019
Other names: C. fetus subsp. fetus, Campylobacter fetus fetus, Campylobacter fetus subsp. fetus, Vibrio fetus subsp. intestinalis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.