STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ddlD-alanyl-alanine synthetase A. (341 aa)    
Predicted Functional Partners:
murC
UDP-N-acetylmuramate--L-alanine ligase; Cell wall formation; Belongs to the MurCDEF family.
 
 0.994
murF_2
Mur ligase middle domain-containing protein.
 
 
 0.990
murD
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase.
 
 
 0.963
murG
Undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase.
 
  
 0.949
murE
UDP-N-acetylmuramoylalanyl-D-glutamate--2%2C 6-diaminopimelate ligase.
 
 
 0.941
mraY
phospho-N-acetylmuramoyl-pentapeptide- transferase.
 
 
 0.919
ftsA
Cell division protein FtsA.
  
  
 0.880
ftsW
Dimethyladenosine transferase.
 
  
 0.880
CZE51062.1
Alpha/beta hydrolase fold.
 
   
 0.867
murB
UDP-N-acetylenolpyruvoylglucosamine reductase.
 
 
 0.851
Your Current Organism:
Campylobacter fetus
NCBI taxonomy Id: 32019
Other names: C. fetus subsp. fetus, Campylobacter fetus fetus, Campylobacter fetus subsp. fetus, Vibrio fetus subsp. intestinalis
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