Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CZE49752.1 | CZE49849.1 | ERS672215_00057 | ERS672215_00154 | Iron-sulfur protein. | Iron-sulfur cluster-binding domain-containing protein. | 0.870 |
CZE49752.1 | CZE50849.1 | ERS672215_00057 | ERS672215_01187 | Iron-sulfur protein. | Uncharacterised protein. | 0.680 |
CZE49752.1 | CZE51089.1 | ERS672215_00057 | ERS672215_01433 | Iron-sulfur protein. | Putative flavocytochrome c flavin subunit. | 0.900 |
CZE49752.1 | CZE51093.1 | ERS672215_00057 | ERS672215_01437 | Iron-sulfur protein. | Flavocytochrome C heme subunit. | 0.900 |
CZE49752.1 | CZE51094.1 | ERS672215_00057 | ERS672215_01438 | Iron-sulfur protein. | Flavocytochrome c flavin subunit. | 0.900 |
CZE49752.1 | frdB | ERS672215_00057 | ERS672215_01208 | Iron-sulfur protein. | Fumarate reductase iron-sulfur subunit; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. | 0.680 |
CZE49752.1 | frdC | ERS672215_00057 | ERS672215_01206 | Iron-sulfur protein. | Fumarate reductase respiratory complex%2C transmembrane subunit. | 0.924 |
CZE49752.1 | nifJ | ERS672215_00057 | ERS672215_00259 | Iron-sulfur protein. | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | 0.999 |
CZE49752.1 | torC_2 | ERS672215_00057 | ERS672215_01436 | Iron-sulfur protein. | NapC/NirT cytochrome C family%2C N-region. | 0.410 |
CZE49849.1 | CZE49752.1 | ERS672215_00154 | ERS672215_00057 | Iron-sulfur cluster-binding domain-containing protein. | Iron-sulfur protein. | 0.870 |
CZE49849.1 | CZE50849.1 | ERS672215_00154 | ERS672215_01187 | Iron-sulfur cluster-binding domain-containing protein. | Uncharacterised protein. | 0.502 |
CZE49849.1 | CZE51089.1 | ERS672215_00154 | ERS672215_01433 | Iron-sulfur cluster-binding domain-containing protein. | Putative flavocytochrome c flavin subunit. | 0.788 |
CZE49849.1 | CZE51093.1 | ERS672215_00154 | ERS672215_01437 | Iron-sulfur cluster-binding domain-containing protein. | Flavocytochrome C heme subunit. | 0.788 |
CZE49849.1 | CZE51094.1 | ERS672215_00154 | ERS672215_01438 | Iron-sulfur cluster-binding domain-containing protein. | Flavocytochrome c flavin subunit. | 0.788 |
CZE49849.1 | frdB | ERS672215_00154 | ERS672215_01208 | Iron-sulfur cluster-binding domain-containing protein. | Fumarate reductase iron-sulfur subunit; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. | 0.502 |
CZE49849.1 | frdC | ERS672215_00154 | ERS672215_01206 | Iron-sulfur cluster-binding domain-containing protein. | Fumarate reductase respiratory complex%2C transmembrane subunit. | 0.492 |
CZE49849.1 | nifJ | ERS672215_00154 | ERS672215_00259 | Iron-sulfur cluster-binding domain-containing protein. | Pyruvate:ferredoxin (flavodoxin) oxidoreductase. | 0.997 |
CZE50849.1 | CZE49752.1 | ERS672215_01187 | ERS672215_00057 | Uncharacterised protein. | Iron-sulfur protein. | 0.680 |
CZE50849.1 | CZE49849.1 | ERS672215_01187 | ERS672215_00154 | Uncharacterised protein. | Iron-sulfur cluster-binding domain-containing protein. | 0.502 |
CZE50849.1 | CZE51089.1 | ERS672215_01187 | ERS672215_01433 | Uncharacterised protein. | Putative flavocytochrome c flavin subunit. | 0.838 |
page 1 of 5