Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CZE51258.1 | bioA | ERS672215_01604 | ERS672215_00557 | Biotin synthesis protein BioG. | Adenosylmethionine-8-amino-7-oxononanoate aminotransferase. | 0.622 |
CZE51258.1 | bioB | ERS672215_01604 | ERS672215_00988 | Biotin synthesis protein BioG. | Biotin synthase. | 0.487 |
CZE51258.1 | bioC | ERS672215_01604 | ERS672215_01603 | Biotin synthesis protein BioG. | Putative biotin synthesis protein. | 0.952 |
CZE51258.1 | bioF | ERS672215_01604 | ERS672215_01605 | Biotin synthesis protein BioG. | 8-amino-7-oxononanoate synthase. | 0.955 |
CZE51258.1 | thiD_2 | ERS672215_01604 | ERS672215_01602 | Biotin synthesis protein BioG. | Phosphomethylpyrimidine kinase. | 0.506 |
CZE51258.1 | yjjP | ERS672215_01604 | ERS672215_01528 | Biotin synthesis protein BioG. | Phosphoglycerate kinase. | 0.473 |
bioA | CZE51258.1 | ERS672215_00557 | ERS672215_01604 | Adenosylmethionine-8-amino-7-oxononanoate aminotransferase. | Biotin synthesis protein BioG. | 0.622 |
bioA | bioB | ERS672215_00557 | ERS672215_00988 | Adenosylmethionine-8-amino-7-oxononanoate aminotransferase. | Biotin synthase. | 0.994 |
bioA | bioC | ERS672215_00557 | ERS672215_01603 | Adenosylmethionine-8-amino-7-oxononanoate aminotransferase. | Putative biotin synthesis protein. | 0.891 |
bioA | bioF | ERS672215_00557 | ERS672215_01605 | Adenosylmethionine-8-amino-7-oxononanoate aminotransferase. | 8-amino-7-oxononanoate synthase. | 0.952 |
bioB | CZE51258.1 | ERS672215_00988 | ERS672215_01604 | Biotin synthase. | Biotin synthesis protein BioG. | 0.487 |
bioB | bioA | ERS672215_00988 | ERS672215_00557 | Biotin synthase. | Adenosylmethionine-8-amino-7-oxononanoate aminotransferase. | 0.994 |
bioB | bioC | ERS672215_00988 | ERS672215_01603 | Biotin synthase. | Putative biotin synthesis protein. | 0.793 |
bioB | bioF | ERS672215_00988 | ERS672215_01605 | Biotin synthase. | 8-amino-7-oxononanoate synthase. | 0.954 |
bioC | CZE51258.1 | ERS672215_01603 | ERS672215_01604 | Putative biotin synthesis protein. | Biotin synthesis protein BioG. | 0.952 |
bioC | bioA | ERS672215_01603 | ERS672215_00557 | Putative biotin synthesis protein. | Adenosylmethionine-8-amino-7-oxononanoate aminotransferase. | 0.891 |
bioC | bioB | ERS672215_01603 | ERS672215_00988 | Putative biotin synthesis protein. | Biotin synthase. | 0.793 |
bioC | bioF | ERS672215_01603 | ERS672215_01605 | Putative biotin synthesis protein. | 8-amino-7-oxononanoate synthase. | 0.938 |
bioC | thiD_2 | ERS672215_01603 | ERS672215_01602 | Putative biotin synthesis protein. | Phosphomethylpyrimidine kinase. | 0.506 |
bioF | CZE51258.1 | ERS672215_01605 | ERS672215_01604 | 8-amino-7-oxononanoate synthase. | Biotin synthesis protein BioG. | 0.955 |
page 1 of 2